BarleyExpDB: The Barley Expression Database

Contact Info

Nanchang, Jiangxi
cuilicao@jxau.edu.cn
0791-83813459

Gene set: Morex V2 Morex V3

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Tissue and Stage	(Floral meristem) PRJEB39672: Transcriptional landscape of floral meristem fates in barley
(16 developmental stages) PRJEB14349: RNA-Seq of 16 developmental stages of barley (Morex cultivar)	(Drought) PRJEB40905: Comparative hormonal and expression analyses of two barley genotypes with contrasting drought tolerance
(Awn Primordium) PRJDB4754: Hordeum vulgare Transcriptome or Gene expression	(Heat) PRJNA324116: RNA-seq (strand-specific library) of barley shoots and roots from control and heat conditions
(Spike) PRJEB19243: Barley SIX-ROWED SPIKE3 encodes a putative Jumonji C-type H3K9me2/me3 demethylase that represses lateral spikelet fertility	(Three different heavy metal of Cd, Zn, and Cu) PRJNA382490: Transcriptome of barley under three different heavy metal stress conditions
(Stomatal complex and total leaves) PRJEB21740: RNA-seq of enriched barley stomatal complexes versus total leaves	(Low nitrogen) PRJNA400519: RNA sequencing of Hordeum vulgare L. under low nitrogen stress
(Root) PRJEB50400: RNA-seq of part of the root system of barley genotypes grown in an agricultural soil under controlled conditions	(Pi starvation) PRJNA430281: RNA-seq transcriptome profiling of barley under Pi starvation and recovery conditions
(Apical spikelet abortion) PRJEB51523: Barley apical spikelet abortion transcriptome	(Water deficit, Root) PRJNA439267: Barley seminal root zone specific gene expression in response to water deficit
(Seedling stage) PRJNA261456: Hordeum vulgare Transcriptome or Gene expression	(Salt, root) PRJNA489775: Transcriptome profiles of salt treated roots of H.brevisubulatum and H.vulgare Transcriptome
(Germinating seeds) PRJNA275710: Next generation sequencing reveals gene transcription activities and alternative splicing events in germinating barley embryos	(Low nitrogen) PRJNA566107: Low nitrogen tolerance related study in barley
(First leaf) PRJNA378334: Leaf transcriptome sequencing of several barley accessions	(Waterlogging) PRJNA602700: Genome-Wide analysis of gene expression responses to waterlogging stress in roots of barley (Hordeum vulgare L.)
(First leaf) PRJNA378723: Leaf transcriptome sequencing and assembly of several barley accessions	(Osmotic stress) PRJNA679445: sequencing of wild and cultivated barley leaves under osmotic stress sensed by roots
(Immature spikes containing microspores at the mid-late to late-uninucleate stage) PRJNA428086: Differential expression profiling of microspores during the early stages of isolated microspore culture in barley using the embryogenic-responsive cultivar Gobernadora	(Al and Low pH, root meristem) PRJNA704034: Transcriptome analysis of barley root meristem under Al and low pH stress
(Dry and germinating seed) PRJNA496380: Barley seed germination	(Infects) PRJNA728113: Transcriptome alterations of an in vitro-selected, moderately-resistant, two-row malting barley in response to 3ADON, 15ADON and NIV chemotypes of Fusarium graminearium
(Anthers) PRJNA558196: Hordeum vulgare anther and meiocyte transcriptome	(Waterlogging) PRJNA744693: RNA-seq analysis of barley leaves responding to waterlogging stress
(Spike) PRJNA668924: INTERMEDIUM-M encodes an HvAP2L-H5 ortholog and is required for inflorescence indeterminacy and spikelet determinacy in barley	(Cold) PRJNA767196: The RNA-seq datasets of monocot and eudicot plants under cold stress (4 degrees centigrade) at 0, 2, 24, and 168 hours (h)
(Leaf) PRJNA744021: transcriptome raw data of 29 barley samples	(Salt) PRJNA781996: Transcriptome and physiology of salt tolerance in barley
(Flowering stage) PRJNA752285: Transcriptomic analysis of differentially expressed genes during the floret opening in barley	Mutant, RIL and NIL
PRJNA755156: BaRTv2: A highly resolved barley reference transcriptome for accurate transcript-specific RNA-seq quantification	(NILs with a L94 background harboring introgressions from Cebada Capa, Leaf) PRJEB25969: Transcriptome analysis on mature, non aged seeds of the spring barley landraces Cebada Capa and L94 and L94 NILs by RNA sequencing
Stress and Treatment	(Mutation in ELF3, LUX1, and EAM7 in Bowman background, Diel (12h light / 12h dark) and constant light， leaf) PRJEB34648: RNA-seq of leaf tissue of barley cultivar Bowman and three derived introgression lines
(Natural allelic variation at Ppd-H1 between Scarlett and S42-IL107, photoperiod Shift, leaf and shoot apex) PRJEB8748: Expression profiling of developing barley main shoot apices and leaves during the vegetative phase and early inflorescence development in response to the photoperiod and natural allelic variation at Ppd-H1	(*NILs carrying Chevron-derived resistant alleles, Fusarium graminearum* infection, spikes*) PRJNA294716: Hordeum vulgare cultivar:M69, Lacey and Chevron Transcriptome or Gene expression*
(Drought) PRJEB12540: The drought-control experiment with barley cultivar Scarlett and Spanish landrace SBCC073	(Morex mutant carrying durable resistance to Cochliobolus sativus Isolate ND85F, Bipolaris sorokiniana infection) PRJNA315041: Hordeum vulgare subsp. vulgare cultivar:Morex Transcriptome or Gene expression
(Salt, meristematic zone, elongation zone and maturation zone of roots) PRJEB13621: A study of transcriptome response to salt treatment across three zones of the root in a barley landrace and malting cultivar	(NILs, Glucan content, grain)PRJNA378582: RNA research on glucan content of hulless barley
(Cold) PRJEB18276: Transcriptional responses to cold in five Pooideae species	(NILs of vrs1, vrs3, vrs4 and int-c.5 in Bowman background, Apex tissue) PRJNA396950: RNA sequencing of Hordeum vulgare near-isogenic lines
(Dark and light, seedling shoot) PRJEB21096: RNA-Seq data analysis of Hordeum vulgare cv. Morex transcriptome to study photomorphogenesis